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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68490426, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPPFILLLF LIMNSSYCEP FEFDFFQNLD PSTNLTEIIN NNNNNSISNN VFKVQNFDSK  60
   61 SSSSSSSSSS SGEGLQEFTP IRDTILQSET KYYSFSVNTK SGIGDFYELL IFLSGNICTQ 120
  121 PSNLLENDTS LAVYYSFNST MFTNNEIGQM QLFKDGFFQG LADLPLTETT TTTNNDTTTT 180
  181 TVPEKILYIA VRAPENTNRT AQWTYQIGVS QHDLVFQWDD RSWGSIVDVD DNSALIVTGN 240
  241 LTKLSSGNYS DLNATNSQFS LYLYSYDNKD YFQGMNNSWC AVRSGPVLVK PEEIETKFIA 300
  301 RHGSIQQQFM VNNLNASTKY IAYIVMDFEG VEYGGAVLRP FEFETMDGTA CELIYDLEFC 360
  361 DQVAYSVPAI GNSSLLASSI AGADNKTLTK KLYDDYAKSL YTNFSKGLQQ IACDTVPEAI 420
  421 YSNLKSCQDC AQSYKNWLCA VTIPRCSTKN FTGYIHRNET NQRNEFLADV IQPNQDYYEV 480
  481 LPCVNVCQAI VRDCPANFGF LCPTKNDSIK LSYYWDVHVS DQWPSCNYLG PLKSSKSGAI 540
  541 KLIINWTIVV VSFTLMVVI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle