YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76573692
Protein type: Globular with Signal Peptide
Type Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSDNFFIKN RTAIIVTALT AFSAAGAYYY YTQQQSTGGS NSSSKSNKSS SEEGNTSTSS  60
   61 SSSKKKKKSK KSKGSATPEP TNSTSSSTTT TTTTTTTSSS DSKSTSSKKI KYPINSEGLP 120
  121 ELTSDIISKL SETEKEEWAM QLKEDGNQEF KNKNFKKAIE FYSAALELKQ DPIYYSNRSA 180
  181 CYAALDDHEN VIKDTTEAIN LKPDYTKCIL RRATSFEVLE KYEDAMFDLT ALTIYGGFSN 240
  241 KSIEQVLERV LRKHSIKIVE SKPKKLILPS AATIGSFFGA FVEETEPEGI NESHENEGVK 300
  301 ALYTALQKIN ANTQNGYEEA DELISKAVTE LESAIESATE LKPVLAIALE YLAAFQFLKN 360
  361 DPVSAAESIE KAISLKPRPR AYVFRALINA DKSSYEAALK DFKTAEELDD KCPDIFYHLG 420
  421 QLFYLTGDLT NAEINFNKAK ELHPDNVYAY IQLACITYKN GQIELANEKF TEAKLKFPTS 480
  481 PEVPNYYGEI LADKGDIQGA CKQFEIASRL QEKLDRFSVG ALPLINEATV ISRESLEKIG 540
  541 EAEELLTKAC ALDPKSELAR ISLAQIKLQK DEVDDAIVLF EESSDLARSI EEKIQATSFA 600
  601 EATKMQKRIK NDPILNNKIA ELMRQSGAM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle