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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.169
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFTINNTNS TVFDSTNNEN MTISEPVQPV SKGPKGITFS GETFIVPETH DMVKTLFDPT  60
   61 VKKSNFELII LSCLFSNLLV FLISNNQIRI YIFIALYIFW RLSYNFGIGW LLQNQSNHNL 120
  121 LVSWSQKYHL FDPENKGALA QSIQNEIKSQ RGENYDIKSM PVEFNTWLIF RKFVDLILMS 180
  181 DFITFCCVVF CSAIKDDYQF INNQSSWLVY SRIVLGSGLI LFNLWVKVNA HNTIKDYAWY 240
  241 WGDFFFRQIN NEELIFDGVF EMVPHPMYSV GYVGYYGFAL IAKSYVVLAI AIFGHFLQMI 300
  301 FLHYIENPHI DKIYGPSKNE INLIKILKLK DLKNFDNLKP LVGLTNFNWM RASDIVNLVL 360
  361 SLTYGIIIPL FANSIKSLFI LTVGMKLFES ISINLSLTLQ SYFKIVTKWS LSNDIPVEKS 420
  421 FSNWAVLYNS LINLTYSSLF GMNLGYFLQK SGSDSPSSGL LFSDWFYLRV FLGLLLIYTQ 480
  481 FWINFSIIDS IGYFGWFYGD FFIPKSQSSI KNITTAGVYR YLNNPEQIFG VCGVMGIFLI 540
  541 YPTVENFVCV GLWVVNNFIR INFIEKSHMV KLYGEQEVNR DSGVTKTVKK HLLPEVIQRR 600
  601 MSNDEAYTRI NGTTHGRRRR SSNLHRNSVA DSLDNFIRDL RNSSTKLSQQ KLIELSQNLS 660
  661 FANSDYKLTI DGLKMQSTES DELKYTTIGT PVTVSWTSPT ENHSVRDWIG LYKIVQTSYS 720
  721 RNKTILSSAG RWTWCKEPKG SFIFDKEKLF WEEGVYEFRY HLDGKHDVAY ISEPFEIKSI 780
  781 ELKVPEFKED AIKFAENLKL EIFDKVIKLT DISEAISPIA NQSDNVIEVY KLISSMISKS 840
  841 TKINITYKIF LNQGDDDLLS IKDVAIKLIN IKHVLEELSY NITDKKDV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle