YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.1597, orf1...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDDSLQSTF DYFPLLPNRA ILSQFYQTVI NKILEEKHKE NKNEVFIIQV LPKFTSGHSL  60
   61 KAIKEKMYNL YNDEDIVISS KRDKQSDNEN DAEIEQEIER DFEVAESLAS EESDPVSIFD 120
  121 TDKQNKNGTV VKHDNLFTKY QFFTSGIWSG IIISGFLLVI LYNALSWLSS LEITYASFEK 180
  181 QIDFDKKNE

Type	Start	End	Confidence
Cytoplasmic	1	141	0.78
Transmembrane Helix	142	165	0.84
Non-Cytoplasmic	166	189	0.75