YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.6167
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSERQKVALV TGASSGIGYA TAIEFAKRGY KVFAGARRLE PMQKLKDDYG VIIFKLDVSD  60
   61 LESVKNAKKF IESETGADYL DFLYNNAGQS CTFPATDVTD AQMKQCFEVN VFGAIRTVRE 120
  121 LVPLIINAQG VIGFTGSVSG IIPFPFSCIY SASKAAIHQY AATLRLEMKP FGVKVINIVT 180
  181 GGVKTDIEDK RDLPESSIYN VPGIKEAFNE RRQMAARNKP MPAEVYAKKV VTDFESANLG 240
  241 GALNIYRGTM STFLSFVLTF VPRFIVEAAL VSKFKLNSVF QYLHEKYSKE KVN

Type	Start	End	Confidence
Signal Peptide	1	22	0.72
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	293	0.86