YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.6156
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDLLHKLNF KIADASPEYK QRRKIQMIRF FTASAVTIFA SRFAYRATVS RQYIPTLFQG  60
   61 NHSPPLSYNF TTDAAVAVGT GTLLCGSVTG MTVFGLCWIL DVSNIKEFGW RMKSMLGGWE 120
  121 SEKKLSEAPM DEESSYIQDS LNDILDGKYD FENDTEEVAG ELKTN

Type	Start	End	Confidence
Cytoplasmic	1	26	0.97
Transmembrane Helix	27	46	0.91
Non-Cytoplasmic	47	75	0.90
Transmembrane Helix	76	102	0.86
Cytoplasmic	103	165	0.97