YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46431662, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFSSLLVST LVSVATAANQ EVEAIQFSNL GFSGTYNQVE KLSNIYKDSC SCEVNKTPVS  60
   61 FSGTNAPLNE EVSVHFRGPL VLNKFASYVS DGFKYGDDSS GDWKRLSYYE GSSGTSENVT 120
  121 FLTSAGKNSS CLGIGLTYAG TDGISKADSS TVLAKNTLIN SNDEFVIFSN ISCGKSGYNN 180
  181 DCGVYRSDIP AYHGFYGTTK MFLFEFQMPN ETHTSTDISN YNMPAIWLLN AHIPRTAQYS 240
  241 MNVNCSCWRS GCGEFDIFEV MNSTEYLHMY STIHDYQGSD DIQTGMAAPA YIERDLTGTM 300
  301 SGGVAFDSSG NAVVWVSNST SFDSTIQASS VNSWVKQAGA DVATTLATVT GQSATTTSKK 360
  361 SGGVSYQPSF ITNLLMTVLT LWVI

Type	Start	End	Confidence
Signal Peptide	1	17	0.99
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	384	0.99