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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68491558, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLQFLLLSL CVSVATAKVI TGIFDSFNSL TWTNAASYSY RGPANPTWTA VIGWSLDGAT  60
   61 ASAGDTFTLD MPCVFKFITD QTSIDLVADG RTYATCNLNS AEEFTTFSSV SCTVTTTMTA 120
  121 DTKAIGTVTL PFSFSVGGSG SDVDLANSQC FTAGINTVTF NDGDTSISTT VDFEKSTVAS 180
  181 SDRILLSRIL PSLSQAVSLF LPQECANGYT SGTMGFSTAG TGATIDCSTV HVGISNGLND 240
  241 WNYPISSESF SYTKTCTSTS VLVTYQNVPA GYRPFVDAYV SATRVSSYAM RYTNIYACVG 300
  301 AASVDDSFTH TWSGYSNSQA GSNGITIVVT TRTVTDSTTA VTTLPFNSES DKTKTIEILQ 360
  361 PIPTTTITTS YVGVTTSYST KTAPIGETAT VIVDVPYHTT TTVTSEWTGT ITTTTTRTNP 420
  421 TDSIDTVVVQ VPSPNPTVTT TEYWSQSYAT TTTVTAPPGG TDSVIIREPP NPTVTTTEYW 480
  481 SQSYATTTTV TAPPGGTDSV IIREPPNPTV TTTEYWSQSY ATTTTVTAPP GGTDSVIIRE 540
  541 PPNPTVTTTE YWSQSYATTT TVTAPPGGTD SVIIREPPNP TVTTTEYWSQ SYATTTTVTA 600
  601 PPGGTDSVII REPPNPTVTT TEYWSQSFAT TTTVTAPPGG TDSVIIREPP NPTVTTTEYW 660
  661 SQSFATTTTV TAPPGGTDSV IIREPPNPTV TTTEYWSQSY ATTTTVTAPP GGTDSVIIRE 720
  721 PPNPTVTTTE YWSQSFATTT TVTAPPGGTD SVIIREPPNP TVTTTEYWSQ SFATTTTVTA 780
  781 PPGGTDSVII REPPNPTVTT TEYWSQSYAT TTTVTAPPGG TDTVIIREPP NYTVTTTEYW 840
  841 SQSYATTTTV TGPPGGTDTV IIREPPNPTV TTTEYWSQSY ATTTTVTSPP GGTDIVIIRE 900
  901 PPNPTVTTTE YWSQSYATTT TVTAPPGGTD SVIIREPPNP TVTTTEYWSQ SYATTTTVTA 960
  961 PPGGTDSVII REPPNPTVTT TEYWSQSYAT TTTVTAPPGG TDSVIIREPP NPTVTTTEYW1020
 1021 SQSFATTTTV TAPPGGTDSV IIREPPNPTV TTTEYWSQSY ATTTTVTAPP GGTDTVIIRE1080
 1081 PPNYTVTTTE YWSQSYATTT TVTGPPGGTD TVIIREPPNP TVTTTEYWSQ SYATTTTVTS1140
 1141 PPGGTDIVII REPPNPTVTT TEYWSQSFAT TTTVTAPPGG TDSVIIREPP NPTVTTTEYW1200
 1201 SQSYATTTTV TAPPGGTDSV IIREPPNPTV TTTEYWSQSY ATTTTVTAPP GGTDTVIIRE1260
 1261 PPNPTVTTTE YWSQSYATTT TVTAPPGGTD SVIIREPPNP TVTTTEYWSQ SYATTTTVTA1320
 1321 PPGGTDTVII REPPNYTVTT TEYWSQSYAT TTTVTAPPGG TNTVIIREPP SPTVTTTEYW1380
 1381 SQSYATTTTV TAPPGGTATV IIKEPPNYTV TTTEYWSQSY ATTTTITAPP GGTDTVIIRE1440
 1441 PPNYTVTTTE YWSQSYATTT TVTAPPGGTD TVIIREPPNY TVTTTEYWSQ SYATTTTVTG1500
 1501 PPGGTDTVII REPPSPTVTT TEYWSQSYAT TTTVTAPPGG TATVIIREPP NYTVTTTGYW1560
 1561 SQSYATTTTI TAPPGGTDTV IIRETSKLHG YHN

YRC Informatics Platform - Version 3.0
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