YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.5195, orf1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSRQVLAGK QIVSTFAKQK AVSQCIKRFN SSKTNSTPPP KYSKGKLLAV LGTLAIGSTI  60
   61 AASFYNKETP KSAFEPNESG DKPEFAEGKV SVIFVLGGPG SGKGTQSDKL VKEKGFVHLS 120
  121 AGDLLRAEQN RPGSKYGELI AKYIREGEIV PQEVTVALLK QAIKENYEQG KTKFLVDGFP 180
  181 RKMDQALTFE NTIAKSAFTL FFECPEQVML ERLLERGKTS GRADDNIESI KKRFRTFIDT 240
  241 SMPVVDYFDK QGKVVKVRCD QPIDVVANQV KDALKTRGI

Type	Start	End	Confidence
Signal Peptide	1	61	0.75
N-region	1	52
H-region	53	58
C-region	59	61
Cleavage Site	61	62
Non-Cytoplasmic	62	279	0.99