YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68491954, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLWGVYTGP QPPKKPLQEM TQEEQAEEGA RQMIGFMNSC PGKTVMAGVS GFALGGFFGL  60
   61 FMASMAYDTP IGTDAVKHIS ELPFKQQMKL QFTDMAKRSY SSAKNFGYIG MVYSGVECTI 120
  121 ESLRAKHDIY NGVSAGCITG AGLAIKAGPQ AALVGCAGFA AFSLAIDMYL NSDAAPPPKN 180
  181 DYDI

Type	Start	End	Confidence
Cytoplasmic	1	41	0.80
Transmembrane Helix	42	63	0.87
Non-Cytoplasmic	64	149	0.74
Transmembrane Helix	150	170	0.75
Cytoplasmic	171	184	0.71