YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.1434
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLKPFTGLL FCCTGLESTT RREVVEKIET LGGIHYSDLM TDVNYLIVGD RDTEKYRFCI  60
   61 KYRPDIIFID ADSIFTIHKH WINGEDENSD LLRIEKYRLA IFAQLNACFS RIEMSTSQID 120
  121 HLVNTVKFRQ RTNTSPEYFR PKNLFKLFVD NGGIAKESLS CHQNFIITAD PRGTRYNKAL 180
  181 EWNVPAIHPI WIVDSVLRGA ALDWKDYILN NNPNDCYDRG CDVWPEVFDC QEKQKQKSQQ 240
  241 QPKRLESTEP EVKRKITNNK TNADIWNSIM DHTKKQTKQL IHDKTWDDDE EEEDNDDDGD 300
  301 TQTKNEKNNQ YKNITTIPKD GKQKPELNGK IHNLDLKLVS ESKENSPNVS ESQLFLGFNY 360
  361 YTVGFDSREF DLLSKAIENY SGEISNDPND DSITHVVIPA KKGYQSMSVL KVLPADLKSR 420
  421 IANGFVKIVT EFFIERCMFY KKIILDRWGQ PMKGLVPSKK SFKICTTGFT GIELLHIEKL 480
  481 IRSFNFEYCE TLSEQRDLLI LNVNLFKKSL MNSPKLFQYK CKDIINCPTG GSVSLMSSKH 540
  541 KVEAAKRWNI PVVSVAYLWE ILELSTNKSH IIMPDITDLQ WCVFAPSNYN KPKSLLEYVK 600
  601 NLDKASRESS FSPKSQENEA LEEPTMDNSV RLPSPRRVNS KQKYGKLVGG KSPKSIKRKL 660
  661 LEAANSFADG QNDHSINPDV TIEEDSMSQI RYQDNESMIN QERLLEKLDG SAVLV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle