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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54648603, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSAHAKTVT EVLRLFEVNE NCGLSSEQVR RSREKYGLNE LPAEEGKSLW ELVLEQFEDL  60
   61 LVRILLLAAF VSFVLAWFEE GEETTTAFVE PIVIIMILVI NAFVGVWQER NAESAIEALK 120
  121 EYEPEMGKVI RADRSGVQRI RARDIVPGDI VEVAVGDKVP ADIRISEIRS TTLRVDQSIL 180
  181 TGESVSIIKH TDPIPDPRAV NQDKKNMLFS GTNIASGKAV GIVIATGIYT EIGKIRNQMV 240
  241 ATEPEKTPLQ QKLDEFGQQL SKVISLICVA VWVINIGHFN DPVHGGSWFR GAIYYFKIAV 300
  301 ALAVAAIPEG LPAVITTCLA LGTRRMAKKN AIVRSLPSVE TLGCTSVICS DKTGTLTTNQ 360
  361 MSVSRMFVIE KIEGVNCSFH EFSITGSTYA PEGHILKDEE PVNCGQYDGL VELATICALC 420
  421 NDSSLDFNES KGVYEKVGEA TETALTCLVE KMNVFNTNLS TLSKVERANT CNSVIKKLMK 480
  481 KECTLEFSRD RKSMSVYCNS EAPNSGHSAS KMFVKGAPES VIERCNYVRV GSTKLPLTPS 540
  541 AREKIMSKIR DWGTGIDTLR CLALATRDVP PKLEDLQLED STKFINYETN LTFVGCVGML 600
  601 DPPRKEVSTS IELCKKAGIK VIMITGDNKG TAVAICRKIG IFSEYEDITD KAYTGREFDD 660
  661 LSPEKQREAC RSARCFARVE PAHKSKIVEY LQSYNEITAM TGDGVNDAPA LKKAEIGIAM 720
  721 GSGTAVAKSA AEMVLADDNF SSIVSAVEEG RAIYNNMKQF IRYLISSNVG EVVCIFLTAI 780
  781 LGLPEALIPV QLLWVNLVTD GLPATALGFN PPDLDIMEKL PRNAREPLIS GWLFFRYLAI 840
  841 GVYVGLATVG AATWWFLYDE DGPQVTFYQL SHFMKCTSDN PLFSGIDCEV FESRYPTTMA 900
  901 LSVLVTIEMC NALNSLSENQ SLLRMPPWLN IWLLGAIIMS MALHFLILYI KPMPLVFQVT 960
  961 PLNWTQWVVV LKISLPVILL DEGLKYISRH HLDGLLKTVE QSWNGTAQMK PHRSHDQTGR1020
 1021 NRFQQHTDNN ISK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle