YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TIM22_XENLA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSNVTPPGD GTLQYSLIMQ HLVGDKRRPV ELIPGGLGGI PTPIKPEEQK MMERVMESCG  60
   61 FKAALACVGG FVLGGAFGVF TAGIDTNVGF DPKDPLRTPT AKEVLRDMGQ RGMSYAKNFA 120
  121 IVGAMFSCTE CLVESYRGKS DWKNSVMSGC ITGGAIGFRA GLKAGVLGCG GFAAFSAVID 180
  181 YYLR

Type	Start	End	Confidence
Cytoplasmic	1	58	0.99
Transmembrane Helix	59	82	0.91
Non-Cytoplasmic	83	159	0.68
Transmembrane Helix	160	183	0.78
Cytoplasmic	184	184	0.53