YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|134110201, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGEGWLFLF AVLMAAVLLF TMVFFIIMFS DLECDYINPI DLCNKLNQFV LPEMIAHAFL  60
   61 TLCFLLSGQW LAFLLNAPLV AYNVNKIMSK NHMYDATEIF RTLSGHKKES FIKLGFYLIS 120
  121 FFYYLYRMIL ALISESD

Type	Start	End	Confidence
Cytoplasmic	1	6	0.86
Transmembrane Helix	7	29	0.94
Non-Cytoplasmic	30	55	0.89
Transmembrane Helix	56	80	0.85
Cytoplasmic	81	110	0.90
Transmembrane Helix	111	131	0.82
Non-Cytoplasmic	132	137	0.72