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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50258845, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAADGKKTV ASRVSRSIDI SRIHSISVPL LFSTIILINM LSRTPLLRSS PRSIAAARRS  60
   61 LATVSDAPVR HYGGLKDQDR IFTNLFCKHD HGIKGALARG DWHKTKDIIL KGDAWLIQTV 120
  121 KDSGLRGRGG AGFPSGLKWS FMNKPGWEKD PRPRYLVVNA DEGEPGTCKD REIMRGDPHK 180
  181 LVEGCLVAGR AMNANAAYIY IRGEFYQEAS HVQQAIDEAY KAGLIGKNAC GSGYDFDVYL 240
  241 HRGAGAYICG EETALIESIE GKQGKPRLKP PFPADVGLFG CPTTVANVET VAVAPTIARR 300
  301 GGSWFASFGR ERNSGTKVFC VSGHVNNPCV VEEEMSIPLQ ELLEKHCGGV RGGWQNLKGI 360
  361 VPGGSSVPVV NRETSEKCLM DYDSLKDNGT SLGTGAVIVM DNSTDMIAAI ARFSKFYKHE 420
  421 SCGQCTPCRE GTSWMMNMMD RMVEGRAQER EIDMLLELTK QVEGHTICAL GDAAAWPIQG 480
  481 LMKNFRPEVE QRLAQFHAKN GQVLFGGKLL SDADRRYALP DNLGGDAIRQ IASP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle