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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50257736, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFGTLLELN SNIEWWDYYV DYDALKKLFP STPLDPSYRA THQNDESSAI LPLRRDLKKY  60
   61 ASPENFKQAL DKERSKVTEF YKSKFEELTG SFEQLEDEVA RMEERDLVQD DTIKEVDEEN 120
  121 EDAEGGPDEQ QDNPSTRETD NLLGPSSSPT RARSPLSRPR PSFVGRLGSS FNFGRRKSAA 180
  181 LPSSRDPDIL EASIQPTYRP SRSPGATRTR MSDSMTSSYF DESPSGRVPG PRSGRRVSDL 240
  241 ESSVDDIRTT SGGHDRRTSV SSLSSHEGDF NWPRRLYHSL GLVQMDPATV PDWAATSVGD 300
  301 VEEGRYGFLH GPNAKQAIFV WTANNDYATV LRIGLKKRIS KVWLDAYALK QYVELNMTAF 360
  361 EKILKKYDKN TDSKLKKQYI SEMVLQSVPW TETSKKDLDE LLARILFLYR RVVAGGDDDL 420
  421 AREQLRSQLR EKVVIDRETV WSQMVSGRNR SEGIFRSVTP DQIASSEPNK NVLRTPFGSL 480
  481 RVPTWLTMKA AMVILATVSS ILIVQLQPLD RVEESNCMAM LVFCIILWAT EAIPLFVTSL 540
  541 AVPFLTVILR VIRSSDGEDE RLSAADATKY IFSQMFSPTI MLLIGGFTIA AVLSKTRLDV 600
  601 MTATRILNAA GSNPSVVLLV LMSVATFASM WISNVAAPTL CYALIKPITD ELHPKSNFSK 660
  661 CLIIAIALAA NIGGQASPIS SPQNLISLGS MDPPLSWLQW FAISIPVSSL SVVLIWAFLH 720
  721 INYRWESDLE IPKMRKNTDP LTVTHYYVLA VSALTILLWC AEKSLEDWLG DMGVIAIVPL 780
  781 LAFFGTGILS KEDFHSFHWS IVFLAMGGIA LGKATLSSGL LDMLNNLLER LVEGMGLYSI 840
  841 LIVFSMLALV IATFISHTIA AVLLVPIATR IGDSLEEPHP RLLIMATALI CSAGMGLPVS 900
  901 GFPNMTAITQ ENKLGQRFIG ASDFLKNGIL SSILAMFVIV TVGYAIMRGL GL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle