YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|134112874, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRRWPALLS PRTTMASRTP LLALRAARTA RPARAPARAL ALSARRQQEP SVSPFKEPAG  60
   61 VNPAEKLAPA QTPLHQYGQY LLASLPKYVQ QFSVYKDELT IYIPPQAVLP VFTFLRDHTQ 120
  121 CQYRQIVDIT AVDFPTKPNR FEVVYHLLSH AHQSRIRVKT YADEVTPVPS VVGLFNGANW 180
  181 YEREVWDMYG IFFEGHPDLR RILTDYGFEG FPLRKDFPLT GYTEVRYDDE KKRVVYEPLQ 240
  241 LTQAFRNFND AASPWEQVGG GDPAAKPQEY NIPPPPEPKK EEKK

Type	Start	End	Confidence
Signal Peptide	1	29	0.90
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	284	0.99