YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PAM17_CRYNB
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRSVFSTLR PVIGQKTTLA PFALSLRHAS SSSSPFSTPT EPTSFHTQPS HSTPTGPLPL  60
   61 TWPSYLSLRR QRRLWSTLTS VPTTFLGLFL GGGYFASLEA DPSQLIFGVE PMFVYGGATL 120
  121 GCMALGYLIG PSVGATLFSL THPSIARGNP APLEVMDREF YHRIRKNRAD PRFQSVQNIV 180
  181 PDFYGEKIVS LSTYRRWLRD QAVYKRKAMH GVPGEDL

Type	Start	End	Confidence
Cytoplasmic	1	73	0.95
Transmembrane Helix	74	96	0.91
Non-Cytoplasmic	97	114	0.85
Transmembrane Helix	115	138	0.87
Cytoplasmic	139	217	0.97