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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|134115369, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.22
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPPASPPPL WISLWMLFTT LIVSWDAGYC LMRPRSLPGG DLSWIWKPYN DFPYGEIDYL  60
   61 YGWKAFNEED GFTAAQALLN VVEIFLAIGY LYLQHISPRD KPLHAVAPLI GFAGTVMTAS 120
  121 KTILYFLQEY FCGWCNVGHN DRRTFWMVWV IPNGTWIILP TIVSIVLGRY IAVALKRDAV 180
  181 YSPVSTSLLR AEFLAEKLAS TLTEEPTQLP AALPLTFHPR TLSVLIVGSN RLAASRALTF 240
  241 LEADAKVFLL TSSEEVAKEV KELEEGGRVS LLQNTASDSV AWSELLTKHD ISLACVTDTL 300
  301 ISTPSRRSLA SATIIYQTCL SLHIPVNISD QPHFSTYTFP SVHRFAGADG PSHLQVAVST 360
  361 NGQGCRMSGR IKREIVSRLP ADISEEDDGP LNTPVPQLPT PSISRRNSEE VTQQLSDEEQ 420
  421 QLRRMRWVYQ MSEYYSFEHL AKISNEEMDK ALDIWGQRNE GYLPHHDVKT VNASEKKGRI 480
  481 LLIGSGPGHP GLLTMAAHTA LRTATLILSD KLVPAEILAL IPDSTKLHIA KKFPGNAEGA 540
  541 QNEMMELALE GAQRGETVVR LKQGDPFVYG RGGEEVLYFR QHGFESTVIP GISSALAAPL 600
  601 MMGIPVTQRG VAESLVLCTG VGRQGKAVQL PGYVKSRTLV MLMGVARISQ IIEVLTSTTA 660
  661 TTASGRDGAA YPPHLPIAVI ERASSPDQRV ILSTLEKIQP ALKQVDERPP GMMLVGWAAL 720
  721 ALEGKGRVDV LDRSEDDEFE MVESWLAEGQ EGEIKGWKVR EGLNDEWRGI LNGII

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle