YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54400588, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARVLFFYLF TLSGVFAGRY FNENEPCYKP QPRRNLQGVK TGPRPYESMN LKELPKEWDW  60
   61 RNIKGVNYVS TTRNQHIPQY CGSCWAHGST SALADRINIK RKAAWPSAYL SVQNVIDCGD 120
  121 AGSCSGGDHS GVWEYAHNKG IPDETCNNYQ AKDQDCKPFN QCGTCTTFGV CNIVKNFTLW 180
  181 KVGDYGSASG LDKMKAEIYS GGPISCGIMA TDKLDAYTGG LYSEYVQEPY INHIVSVAGW 240
  241 GVDENGVEFW VVRNSWGEPW GEKGWLRIVT SAYKGGSGSQ YNLAIEEDCM YGDPILPKNY 300
  301 L

Type	Start	End	Confidence
Signal Peptide	1	17	0.99
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	301	0.99