YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54400464, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARDKILTVL AMLWLYFCGG LAQTDSSVPC DDRRVEKVVN LTLGTHNKMI TEGAQLALYE  60
   61 ILEATKAQNE SGDVLLVRFS SRETDCPAGG EKTWHECDYL QQADKALRIC HAKVQFTEAG 120
  121 EELLLHDCLE PAIIASVAPC LGCPENIDVH KEELRQPLIH SLSKANSMIN HVHFFIFKDL 180
  181 TSATKQVVAG FRYKLQFEIE KSNCTRPEFK IVTEECHPLL EKTEVLKCNS SVDVAPWRHE 240
  241 VPEVHVVCEA GVSKTNSRFK RPPGWSPLRM LPQAKESSEE SKESISPPKH VPLNCPTKPW 300
  301 KEFKPIIAPP NATEPSEPSA DTALSDLDLI R

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	331	0.99