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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50254984, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSNAWTFTP QDALGYFGTN PDTGLTEEQV KRNREAYGEN SLPESAPNSL FKLILAQFQD  60
   61 QLVLILLGSA VVSFILAIFE DSAEPGGSWM TAFVEPLVIL LILVANAAVG VIQETNAEKA 120
  121 IDALKEYSPD EALVLRNGRL SRVSASSLVP GDIISVHVGD RIPADCRILS FSSSSFRVDQ 180
  181 AMLTGESMSV GKTDAAIKDD SAVKQDMTNM LFSGTIVVNG AAKALVVLTG SRTAIGAIHS 240
  241 SISKGDEEEE KTPLKRKLDD FGDQLAKVIS VICILVWLVN IRHFNDPSHH GWLKGAIYYL 300
  301 KIAVALAVAA IPEGLAAVIT ACLALGTKKM AKRGAIVRNL PSVETLGCTN VICSDKTGTL 360
  361 TTNQMSVSRF VTCDDAGFTE YQVGGTTFAP IGAVTRSDGQ PLDKSTLITP IIRKLSEICA 420
  421 ICNDAKVAYH PESETYSNVG EPTEAALKVL VEKLGSDNDL FNSGLATLDP LARATAVNDY 480
  481 YDSNVKRLLT FEFSRDRKSM SVLSQSSNGT SLLVKGAPES VLERCSNVLL PNGVKAFTPE 540
  541 LRKKLEEKQL EYGHKGLRTL ALAYVDESDG DVSHYKTDRS EDYVKFERDM TFVGLIGMLD 600
  601 PPRPEVRDAI AKCKTAGIRT IVITGDNKNT AETICREIGV FGHDEDLTGK SYTGRELDAL 660
  661 SHEEKIAAVQ RASLFSRTEP THKSQLVDLL QGLGLVVAMT GDGVNDAPAL KKADIGIAMG 720
  721 TGTDVAKLAA DMVLANDNFA TIEKAVEEGR AIYNNTKQFI RYLISSNIGE VVSIFLTVLL 780
  781 GMPEALIPVQ LLWVNLITDG LPATALGFNP PDHQIMKTPP RSGKEPLVGG WLFFRYMVIG 840
  841 TYVGCATVFG YAWWFMFYTG GPQISFYELT HFHQCSSVFS NLDCSMFTGL PAQRATTVSL 900
  901 SILVVIEMFN ACNSLSENES LFVLPLWSNP YLVASIILSM ALHFMILYVP FFREMFRITA 960
  961 LNKEEWIAVI VISFPVIVID EVLKFISMRM VKSEKSGKAQ LKEKAE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle