YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|182890542, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWIPMLSLTA LPHVGGIFGG IITRREVKTW YSTLNKPSWR PPNAAFPVVW TTLYTGMGYG  60
   61 SYLVWKELGG FTQDAMVPLG LYGLQLALNW AWTPIFFGAH KIQLALIELL LMSGTVAATM 120
  121 VSWYPISRTA TLLMVPYMAW LCVATSLNYC IWRDNPEPKK ED

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.80
Transmembrane Helix	6	23	0.84
Cytoplasmic	24	43	0.85
Transmembrane Helix	44	63	0.92
Non-Cytoplasmic	64	74	0.79
Transmembrane Helix	75	96	0.84
Cytoplasmic	97	103	0.77
Transmembrane Helix	104	126	0.88
Non-Cytoplasmic	127	132	0.73
Transmembrane Helix	133	152	0.91
Cytoplasmic	153	162	0.93