YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18450337
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKIFYFIRK PIAITLVLVV ICGLIYPLVL MGVSKVVFPE QANGSLVRIN DSVVGSKLIG  60
   61 QSFSGEGFLH SRPSAVNYNT YTVQEKKDYK YNGVASGSSN YAMTNPDLTK RTNKDIKTFL 120
  121 RENPTIKKNE IPTDLVTSSG SGLDPHISPQ AAAIQIPSVS KKTGISEKKL KKIVRDSTEE 180
  181 KFIGIFGERT VNVLEVNVDI VKAKKLGKFG SK

Type	Start	End	Confidence
Cytoplasmic	1	11	0.87
Transmembrane Helix	12	33	0.89
Non-Cytoplasmic	34	212	0.96