YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|44970635
Protein type:	Transmembrane
Type Confidence:	0.73
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRKRNNIVN IRYNFFLIYF WVIFMYPCET NKGNVKPLNF IKGKNIFLNI TKNKVKHLNT  60
   61 INGIETISNV ENKNILNDTN YINEMKNIKV RRNISEALHM AIYEEMKKDK GVYVLGEDVG 120
  121 LYGGSYKVTK NLAHFFGFSR VLDTPICENA FMGLGIGSAI NDLRPIIEGM NLSFLILAFN 180
  181 QISNNACMMR YMCDGQFNIP IVIRGPGGIG KQLGPEHSQR IESYLMSIPG IKIVSCSTPF 240
  241 NARGLLKSAI RDNNPILFIE HVLLYNYEQE IPLLPYTLPI DKAEVVKNGK DLTVLSYGIT 300
  301 RHLASEAAKE LTKFNIDIEV IDLISLKPFD METIEKSLKK TKKCLILDES AGFGGIGAEL 360
  361 YTQVIEMFSS YLITKPIRLC TKDIPIAYSN KYEDACIIKK EDIVYMSTYL HSLSS

Type	Start	End	Confidence
Cytoplasmic	1	8	0.69
Transmembrane Helix	9	28	0.66
Non-Cytoplasmic	29	415	0.99