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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|23953881
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQEDQEVLI RGGKATSTSA ESLDNNNGQS YEQSSINQGF SKNYGTLSPP SPTLTTDNLT  60
   61 YSWYNLDVFG AVHQPGSGWK QLLNRVKGVF CNERHIPAPR KHLLKNVSGV AYPGELLAVM 120
  121 GSSGAGKTTL LNAIAFRSSK GVQISPSTVR MLNGNPIDAK EMQARCAYVQ QDDLFIGSLT 180
  181 AREHLIFQAM VRMPRHTTQK QKVQRVDQVI QDLSLGKCQN TLIGVPGRVK GLSGGERKRL 240
  241 AFASEALTDP PLLICDEPTS GLDSFMAHSV VQVLKKLSQK GKTVILTIHQ PSSELFELFD 300
  301 KILLMAEGRV AFLGTPGEAV DFFSYIGAQC PNNYNPADFY VQVLAVVPGR EAESRERIAK 360
  361 ICDNFAVGKV SREMEQNFQR LEKSNGLPKE DENGFTYKAS WFMQFRAVLW RSWLSVLKEP 420
  421 LLVKVRLFQT TMVAVLIGLI FLGQQLTQVG VMNINGAIFL FLTNMTFQNA FATITVFTSE 480
  481 LPVFMRETRS RLYRCDTYFL GKTIAELPLF LIVPLIFTAI AYPMIGLRPG VDHFLTALAL 540
  541 VTLVANVSTS FGYLISCACS STSMALSVGP PVIIPFLLFG GFFLNSGSVP VYFKWLSYLS 600
  601 WFRYANEGLL INQWADVKAG EITCTSSNTT CPSSGEVILE TLNFSASDLP FDFVGLALLI 660
  661 VGFRISAYIA LTVRARRKE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle