YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54288772
Protein type:	Globular with Signal Peptide
Type Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLVLMGLPG AGKGTQAEKI VETYGIPHIS TGDMFRAAIK EGTPLGLQAK EYMDRGDLVP  60
   61 DEVTIGIVRE RLSKDDCQKG FLLDGFPRTV AQAEALENIL AELNRSIDYV IHIHVDKDIL 120
  121 MERLTGRRIC KNCGATYHLV FNPPAKPGVC DKCGGELYQR ADDNEETVAN RLEVNVKQTQ 180
  181 PLLDFYEKKG YLRHINGQQD IEKVFADIRE LLG

Type	Start	End	Confidence
Signal Peptide	1	17	0.56
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	213	0.99