YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: dop-3
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAGQHHVTD IESPLMVVLW RVAAGVFLPL VPTMAVFGNV LVIMSVFRER SLQTVTNMLI  60
   61 VSLAVSDFMV AIGVMSFGVY YEWNDFKWGL GSFFCHVYQA LDVACSTASI LNLLAISLDR 120
  121 YIAIGHPISY AQYGARGGRA MISITIVWGV SVAVALPLLL GVNPMEENDL QECELANPYF 180
  181 NMISSIFSFF IPCIAMIILY TIIFRRLRQR ERARSLRQAQ RSENDKISSA LLGGAQIARQ 240
  241 MGKHFKNRTD QILLEISFQT SSFPTMSESS EDASTISPMI NSFNNFLPKK TPYPSTSIPA 300
  301 IPECGSMPNL TIIERPEAEK EKEISIMDLR DTVEMLDDKY SSAILTSFQT SRSFGEELEE 360
  361 ILPFIDGSNS VKHSREQLHT TRSNTSTTRL LDVKPELRSI SVPSIQDEKK LSQKSNDLPF 420
  421 SHQNGTHKQK LLPNPGILMK SKSTTLLKTN GYMDTDSLNR NSHKKSLADL LANDEFSFSD 480
  481 SMRVYKNRLF KSLSRATSGW NKPRPSRHMV KKATKQMRRE HKATVTLAVV LAVFLFCWLP 540
  541 FFVLHLSNSI CLIIDENSAC VGFLPLYLAT WLGYLNSSLN PLIYTVFDQR FRNAFRNILS 600
  601 CGIFKKR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle