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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15920248, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLEKVLVVG AGTMGHGIAE LFAIAGYEVY LSDISQEILD NALNKIKWSL DKLQEKGQLK  60
   61 ESTSNIISRI KTVVGLNESV NDADFAIEAA IERLDLKRQI FSKLDELLPT HAILATNTSS 120
  121 LSISKIAEAT KRPEKVVGMH FFNPPVLMQL VEVMKGEKTS DETAKTTYEL AKKLGKIPIM 180
  181 INKDVPGYVV NRILGEIISA SCIILQKGIA DYLTIDAVAK YKLGFPMGVF ELLDYTGIDV 240
  241 NYYVSKSLEE YGIKSPCSAL FEEKVKKNEL GVKSGKGFYS YPAPGKYSKP EIPKELADKL 300
  301 DPVLIIALGV NEASRLFRQG IVSKEDIDLG VKLGLGFPKG IFQYADELGI DNVVKAINSL 360
  361 SVEEPDRLLL DMVNEGKLGI KSGSGFYEYG KVEEKKLNTL IVRVEPPLAW IILNRPERLN 420
  421 ALSMELIGEL NKALDELEND SRVRVIILSG SGRAFSAGAD VTSFLTLKPI DVIRFRSLRE 480
  481 LTNKIQFYTK PVIAAINGYA LGGGLEIALA CDIRIASENS MLGQPEINLG IIPGAGGTQR 540
  541 LPKLVGKGRA KLLIYTGDMI PAKDAYEMGL VDIVVPTGRF EDEVRRIALK IAEKSPLSLL 600
  601 AAKLAIELGY DANIFSGEYL ESSLFGLLFT TKDVQEGVRA FLEKRKPEFK GE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle