YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6683935, gi\|6...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLKFYVLVF LILCLKNVVK GDKCETEFSK LYPESNSLTG LIYAHTAHVH KLSMWVYFIY  60
   61 NHFSSADELI KYLEKTNINT LENSDHTCFA RAVTLYLFYY YLKDIKSMLS TDDYQSFFKN 120
  121 KFKDINPLFI NDFILILNDK KFMENLDLYI MKESEREHLV IKKNPFLRVL NKASTTTHAT 180
  181 YKSNPYFIVG SRVHTPYKDY LGDFNKYTEI SVLNYVRDYN FLIYAGSREN YYNSDIAGPA 240
  241 RSVNNVISKN KTLGLRKRSS SLALVGTNNN DPIFAYCEKD NKSEYYGTPD DLITSFFSII 300
  301 KTKMLNSHKT FLRQFDYALF HKTYSIPNLK GFRFLKHLFQ KKNLVNFVGM YENHVSTEIN 360
  361 FLAEDFVELF DVTMDCYSRQ YSNRAAENFK AIRELNVL

Type	Start	End	Confidence
Signal Peptide	1	21	0.94
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	398	0.99