YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33152357, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVLKSLLLF SFTLSSLVSQ ATLWEKIRQP VAGQPQSIGG YSNGCIIGAR PLALKGNGYQ  60
   61 VIRSIKNRYY GHPQLLSYLT DLAKRTRTAG LPPILIGDMG MPAGGRFASG HASHQTGLDA 120
  121 DIWLRFGPMD DKTARNPAGL ATIMVNRTLQ RVDEKRWTNQ HTTLIRLAAQ DQRVNRIFVN 180
  181 PAIKLKLCQT AGKNRAWLQK IRPWYAHDSH FHVRLSCPSD ARNCENQPPI AAGDGCGDEL 240
  241 HSWFLPAPAN TTAAKPKVIP MVPVQCQMIL SSQGLN

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	276	0.99