YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33148567, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPENKANFQ RIIRAMGYSM KGLKSTYIYE AAFRQELGLA IIFIPLGFYL GDTAIEKVLL  60
   61 VGSTLLVLIV ELLNSAVEAV VDRIGSEYHE LSGRAKDIGS AAVFVTMLLF AITWLLLIF

Type	Start	End	Confidence
Cytoplasmic	1	30	0.86
Transmembrane Helix	31	51	0.71
Non-Cytoplasmic	52	57	0.61
Transmembrane Helix	58	77	0.75
Cytoplasmic	78	97	0.73
Transmembrane Helix	98	118	0.95
Non-Cytoplasmic	119	119	0.83