YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TATB_HAEDU
Protein type:	Transmembrane
Type Confidence:	0.76
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFDIGFSELI LIFVVGLVVL GPQRLPVAIR TVMGWVRTIR SLATNVQHEL AQELKLQELQ  60
   61 ESIKKAEAMN LTTLSPELTQ TVEDLKQSAQ KMQNDLNNAN QIGKLTDEQV ADIQQNIANA 120
  121 QPSEITEANE LDESKLTAYY PPDDDLVSPS TTKLEQDKQN VN

Type	Start	End	Confidence
Non-Cytoplasmic	1	8	0.65
Transmembrane Helix	9	27	0.72
Cytoplasmic	28	162	0.67