YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33241188, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESSYYSTFI LTILLAIGLA FFLRAASKDR TTIVDISSPL PPLDVLNGIS NWLEERGWRR  60
   61 EGGDADRKVL RFNGRVSSSP VLAVFLSILC GLGGACLGLV ICQLYASLNW WPLVLVLLGP 120
  121 FAGFFYRNRA SRIESLEMRL VSKVNDKKSQ LRIKAHRDEL IAIEAELAEN LQLASDGSLT 180
  181 SSPI

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.88
Transmembrane Helix	6	26	0.90
Cytoplasmic	27	80	0.95
Transmembrane Helix	81	101	0.97
Non-Cytoplasmic	102	107	0.77
Transmembrane Helix	108	128	0.90
Cytoplasmic	129	184	0.97