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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|33636651
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPVVPGLVA LATTTPAVAE AVAPPPHPDV QRRQHQPPDL LQGASSSAEY FDSGQGASGS  60
   61 SGAASSGFSG SFYNALQMMD TTESSGAGTS QSTPPALGAS STTASKSTCA TVGSSTASTS 120
  121 AAAAAAASAS AGSSHQSPYD LRRKISASSH EQWPTSSSSA VAAAAAILVG PSSSSPPLVN 180
  181 PGASPSSSSS SSSSSSSSSS ASSSSSSSNV QAPSTSATFP VNNAPTTGAT LAQPPNVHSS 240
  241 VPQQHCGALP VGAAIEDNNY MLPARKRSRR LYTQGGEMGP SAGATGEAAG AGTAASGGAG 300
  301 CAPTAAQYLQ YELPDEVLLA IFSYLMEQDL CRLALVCKRF NTIANDTELW KRLYQSVFEY 360
  361 DLPLFNPELC KFVFEKPEES EYANPWKESF RQLYRGVHVR PGYQERRSSG RSIVFFNTIQ 420
  421 AALDYPEERA AAGVFVPAGA GAGNVVSAGL SNTSASAGVG GASVNALVNI YEEQVAPTEH 480
  481 PGPLIFLHAG HYKGEYLFID SDVALVGAAP GNVAESVILE REAGSTVMFV EGAKYAYVGY 540
  541 LTLKFSPEVT STVSHHKHYC LDIGENCSPT VDNCIIRSTS VVGAAVCVGG VNANPVIRNC 600
  601 DISDCENVGL YVTDYAQGTY EHNEISRNAL AGIWVKNFAS PIMRENHIHH GRDVGIFTFE 660
  661 NGMGYFEKND IHNNRIAGFE VKAGANPTVV KCEIHHGQTG GIYVHENGLG QFIENRIHSN 720
  721 NFAGVWITSN SNPTIRKNEI YNGHQGGVYI FGEGRGLIEH NNIYGNALAG IQIRTNSDPI 780
  781 VRHNKIHHGQ HGGIYVHEKG QGLIEENEVY SNTLAGVWIT TGSTPVLRRN RIHSGKQVGV 840
  841 YFYDNGHGKL EDNDIFNHLY SGVQIRTGSN PVIRGNKIWG GQNGGVLVYN GGLGLLEQNE 900
  901 IFDNAMAGVW IKTDSNPTLK RNKIYDGRDG GICIFNGGKG ILEENDIFRN TQAGVLISTQ 960
  961 SHPILRRNRI YDGQAAGVEI TNNATATLEH NQIFKNKFGG LCLASGVQPI TRGNNIFNNE1020
 1021 DEVEKAVSSG QCLYKISSYT SFPMHDFYRC QTCNTTDRNA ICVNCIKNCH AGHDVEFIRH1080
 1081 DRFFCDCGAG TLSNQCQLQG EPTQDTDTLY DSAAPMESHT LMVN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle