YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CF451_DICDI
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKLISLLLV CLVAIALVNA DCAIDFDSDT VNSVTSSDWS CLAASNDRVI MQVFSGGYGY  60
   61 TSGIASAVQG AQAAGISTID LYAFLCNQCS GNSPSSSAIQ SIVSQLQNDG VSYNMLWIDV 120
  121 EQCDGCWGDL GDNAAFVQEA VETAQNLGVN VGVYSSIGEW SQTVGNLSGL GVDLWYAHYD 180
  181 NNPSFSDSSF YEFGGWTSPT MKQYAGNGNE CGVSVDMNFF GSGTCSASTG SGSGSSSGSS 240
  241 SGSSSGSSSG SGSSSGSGSS SGSSSGSGSG SSSSGSGSGS GSSSGSGSSS GSGSGSS

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	297	0.99