YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52421320, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYTALLLSSS LFLLHVTCTP QTHSHHGRRV CVGDVWSRRV SYSTESFLQP VHKPYITMCQ  60
   61 NHRMCSTYKT IYKVSYRQVT RAAPNLQIYP ECCPGWRRMH SHNCNQAVCE QSCANGGSCV 120
  121 RPNHCACLRG WTGRFCQIDV DECKEAQHCS QKCVNTLGSF QCVCEEGFSL DEDKVTCSKN 180
  181 PASSRNTGGG LGLVENVTEE VQILKNRVEL LEQKLEMVLA PFTTLLPLDG AGDTNSFLSE 240
  241 RTNFLSHSLQ QLDRIESLSE QVGFLEERIG ACGCQEN

Type	Start	End	Confidence
Signal Peptide	1	24	0.94
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	277	0.99