YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52219130, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSFIAVKHR TSAFTVGLLA WASRGQSRMS SSVPVAAVCQ MTATPDKEAN FRTCTRLVEQ  60
   61 AKVGGASMVF LPEGFDYIGS SREETLQLSE SLDGETISRY THLARKLDVW LSLGGFHEQG 120
  121 HDWKTDRRIY NSHIIINGQG EIVSVYRKTH LFDVELSSKG VSLKESAFTI PGPRLVPPVQ 180
  181 TPIGKVGLGV CYDLRFPELS AALQRHGAEI LTYPSAFTVA TGTAHWEVLL RARAVETQCF 240
  241 VLAAAQVGSH HSKRVSYGHA LAVDPWGEVL GDCGGTQEGV TLAHINLQKL RDIRRDMPVL 300
  301 QHRRQTDFYC SLDSKI

Type	Start	End	Confidence
Signal Peptide	1	25	0.98
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	316	0.99