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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|52219050, gi|...
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPASRYTLQ ARRCIHALKV VKAEHVAPQI YSTRWFSSVP RITTHYTVYP RDKDSRWEGV  60
   61 EMERFADEAD VVIIGGGPAG LSAAIRLKQL ANQHEKELRV CVVEKASQIG AHTLSGACLE 120
  121 PTALNELIPD WKERGAPLNT PVTEDKFSIL TEKYRIPVPI LPGLPMNNHG NYLVRLGHFV 180
  181 RWLGEQAEEL GVELYPGYAA AEVLFHEDGS VKGIATNDVG IAKDGSPKDV FERGMELHAK 240
  241 VTMFGEGCHG HLAKQLYKQF NLREKCEPQT YAIGLKELWV IDEKKWRPGR AEHSVGWPLN 300
  301 RNTYGGTFLY HLNEGEPLVA LGFVVGLDYT NPYMSPFREF QRWKHHPSVM STLEGGNRIA 360
  361 YGARALNEGG FQSIPQLTFP GGMLIGCSPG FMNVPKIKGT HTAMKSGMLA AETAFSKITD 420
  421 ENLQSQTTGL YIPEYEEALK KSWVWKELRS VRNIRPSFHT YFGLYGGMVY TGIFYWIFRG 480
  481 KEPWTLKHSG SDYAQLKPAK DCSPIEYPKP DGKISFDLLS SVALSGTNHE HDQPAHLTLK 540
  541 DDSIPVSKNL AIYDGPEQRF CPAGVYEYVP LETGDGMRLQ INAQNCVHCK TCDIKDPSQN 600
  601 INWVVPEGSG GPAYNGM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle