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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CCD47_DANRE
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRHLVFLLLP ALLLLLALPD TRGRYNDDFD DGEDIAEFDD NDFAEFEDVS EDPAVDVEKE  60
   61 PPPRPAPSST PVEDDEDEAT VENEDGQDEF EDTDAQDQDM YNKYDTDEFE GYEKSNPSFK 120
  121 DTLIYREVPA HLQNSWESYY MEILMVTGLL AYIMNYIIGK NKNSRLAQAW FNSHRELLES 180
  181 NFALVGDDGT SKEATSTGKL NQENEHIYNL WCSGRVCCEG MLIQLKFLKR QDLLNVLARM 240
  241 MRPTCDQVQV RVTLNDEDMD TFVFAVGSRK AMARMQKEMQ DLSEFCGDKP KSGAKYGIPD 300
  301 SLTILSEMGE VTDGVMDNKM VHYLTSHADK IESIHFSDQF SGPKVMQEEG QPLKLPETKK 360
  361 TLLFTFNVPG MGNTSPKDMD SLLPLMNMVI YSIDKVKKLR LNREGKQKAD RNRARVEENF 420
  421 LKQTHAQRQE AAQTRREEKK RAEKERIMNE EDPERQRRLE EAAQRREQKK MEKKQMKMKQ 480
  481 IKVKAM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle