YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33521676, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDEDHPIYA PFFGVMGAAS AIIFSALGAA YGTAKSGTGI AAMSVMRPEL IMKSIIPVVM  60
   61 AGIIAIYGLV VAVLIAGGLE EPKGYTLFKG FVHLGAGLAV GFSGLAAGFA IGIVGDAGVR 120
  121 GTAQQPRLFV GMILILIFAE VLGLYGLIVA IYLYTK

Type	Start	End	Confidence
Non-Cytoplasmic	1	11	0.71
Transmembrane Helix	12	34	0.90
Cytoplasmic	35	53	0.75
Transmembrane Helix	54	76	0.93
Non-Cytoplasmic	77	91	0.73
Transmembrane Helix	92	115	0.88
Cytoplasmic	116	127	0.70
Transmembrane Helix	128	153	0.88
Non-Cytoplasmic	154	156	0.71