YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54020910, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCGNTMSAPL PAIVPAARKA TAAVIFLHGL GDTGHGWAEA MASIKSPHVK YICPHAPIMP  60
   61 VSLNMNMAMP SWFDIIGLSP DAQEDEAGIK RAAENVKALI DQEIKNGIPS NRIILGGFSQ 120
  121 GGALSLYTAL TTQQKLAGVV ALSCWLPLRS SFPQAAANSA NKDVAVLQCH GESDPLVPLM 180
  181 FGTLTSEKLK TIISPANINF KTYSGLMHSS CNQEMTDIKQ FIDKQLPPVN

Type	Start	End	Confidence
Signal Peptide	1	22	0.64
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	230	0.96