YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FOLT1_ARATH
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASWQWENA TAGAVAGFAT VAAMHSLDVV RTRFQVNDGR GSSLPTYKNT AHAVFTIARL  60
   61 EGLRGLYAGF FPAVIGSTVS WGLYFFFYGR AKQRYARGRD DEKLSPALHL ASAAEAGALV 120
  121 CLCTNPIWLV KTRLQLQTPL HQTQPYSGLL DAFRTIVKEE GPRALYKGIV PGLVLVSHGA 180
  181 IQFTAYEELR KIIVDLKERR RKSESTDNLL NSADYAALGG SSKVAAVLLT YPFQVIRARL 240
  241 QQRPSTNGIP RYIDSLHVIR ETARYEGLRG FYRGLTANLL KNVPASSITF IVYENVLKLL 300
  301 KQHPTTKD

Type	Start	End	Confidence
Cytoplasmic	1	8	0.75
Transmembrane Helix	9	27	0.84
Non-Cytoplasmic	28	65	0.85
Transmembrane Helix	66	88	0.92
Cytoplasmic	89	107	0.86
Transmembrane Helix	108	130	0.78
Non-Cytoplasmic	131	308	0.80