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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Kap3-PG
Protein type: Transmembrane
Type Confidence: 0.79
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQFVLLLIFQ IISGLVLLPI VIHYVYYIIN AIAGDLCEQK RAQREQQLQR SPTPRHQNRH  60
   61 PPHPPPTEEE PVLSINNLTN SSRSPTAAAT TTAMQTNDDA KFIKKRWKGG SIEPHPTDKA 120
  121 LIVNYQLEAT VFGEPNNPMI EEKKHCQKII RLRSLNAKTD PAALAREVVE KCDLIHKSQL 180
  181 NDVEQIIFYL KNRKDNASND IPDNNTHSRR SAALHTSHTR SSARSHSSVA AMTSSTGSGG 240
  241 GSTGASNGVS NALSAATPTA DVSINNIDEY VELLYEELGE RIRGSAMILQ MARNPDNLEE 300
  301 LEKNEACLSA LSRVLREDWR KSLDLSTNII YIFFCFSTYT KFHPLIVQYK IGSLCMDVID 360
  361 YELRRYETMR NELDVRKQPN GSSTPHSAKA SKEKLNRSTD DFLDIMNEEK PKEMEPPRRR 420
  421 IPELKQRPKS GNWSSFHGSM SSSLIKSQIL NSSYHESLCA GGSPGGDTPA VPAEQKAQSN 480
  481 ESLDRNDPKV KKEEIDRLNK QLKIFAKKQE QLLRVAFYLL LNMAENVKLE EKMRRKHIVK 540
  541 MLVKALDRQN IDLLMLVSTF LKKLSIVGDN KDEMGALNIV AKLPRLFQST HTDLVQVTLK 600
  601 LVFNLSFDGG LRRKMIAAGY LPMLVMFIND EKHHGIAVKI LYHMSLDDKV KGMFTQTECV 660
  661 QMATDAIILN LNVKVDLDLI ALCINLSLNR RNAQIMVEGQ RLHSLMDRAF KYQDALLMKL 720
  721 LRNLSQHESL QLQFIDYVGD LARILTICDD EAFIVECLGI LGNLALTDLD YSQILQNFQL 780
  781 IPWIRQILLP CARMDDLVLD TIVYLGTCAC DELCALLFCR AKVVISLIEL LKAKQEDDEI 840
  841 VLQIIFVFQQ ILRHESTREY MIKETESAAY LIDLMHDKNE EIRKVCDYCL DIIAISDSEW 900
  901 AKRIKLEKFR NHNSQWLCMV ESQQDQDNEQ DYADQEDECD NDLDTYLRSE YLDNCDLYND 960
  961 NADNDSNSNS NHSNNNPASP AMSTYSRPLS TYRRSQDLDD LYNMTSSSKS QGSSDNNYIF1020
 1021 KSNKSLDADG LHEELLMA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle