YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|33589448
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSAIVGAAS AIGGAVTAAT SNSWFIPMLM AAVAYFQYEE IIDPESKPSD VGGDDILDHY  60
   61 DFIVIGAGSA GAVVANRLTE VENWNVLLLE AGGDETELTD VPLMAGYLQL SKIDWQYKTE 120
  121 PSGTSCLAMQ GGRCNWPRGK VLGGSSVLNY MLYLRGSKHD YDNWEAMGNP SWSYRDALYY 180
  181 FKKSEDNTNQ YLANTPYHAT GGYLTVGEAP YHTPLAASFV EAGVEMGYEN RDLNGEKMTG 240
  241 FMIAQGTTRR GSRCSTSKAF LRPARLRPNL HISMNSHVTR IMIDPVTKLA FGVEFVKDQK 300
  301 LYHVRATKEV VLSGGSVNSP QLLMLSGVGP RKELAKHRIP LIKELSVGEN LQDHIGLGGL 360
  361 TFLVNQPVSI VENRFHTMST VLQYVVFGQG PLTILGGVEG LAYVNTKYAN SSLDWPDIEF 420
  421 HFVSGSTNSD GGSQLRKAHG LTDAFYRAVF EPINNRDAWS IIPMLLRPRS VGNIRLRSGN 480
  481 PFDYPYIFPN YLTDDFDMKT LIEGVKIAVA LSLTKAMQRF GSRISSIRWP GCEQVPLFTD 540
  541 AFWECMVRRY TSTIYHPVGT CKMGPYWDKD AVVDAKLRVY GIRGLRVIDA SIMPKLVSAN 600
  601 TNAPVIMIAE KGSDMIKEFW IKNTIV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle