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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|29888033
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMPPTFLLLL SGALTLTETW AGSHSMRYFL TAVSRPGPGE PRFIAVGYVD DTQFVRFDSD  60
   61 AASPRMEPRA PWMEQEGPEY WEEQTRRAKD HAQTFRVNLN TLRGYYNQSE AGSHTLQWMC 120
  121 GCDVRPDGRL LRGYSQFAYD GADYIALNED LRAWTAADTA AQITRRKWEA AGNAERWRNY 180
  181 LDGECVEWLL RYLENGNETL QRADPPKTHV THHPISDREV TLRCWALGFY PEEISLSWQR 240
  241 DGEDLTQDTE LVDTRPAGDG NFQKWAAVVV PSGEEQTYTC RVQHEGLPEP VTLRWEPPPQ 300
  301 STILIVGIIV GLVLLGAVLA GAVIWRKKRS GEKRGSYVQT ANSDSAQGSD ASLPQKV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle