YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46360353
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VILDGGQIVT VSLTATLASI GAASIPSAGL VTMLLILTAV GLPTEDISLL VAVDWLLDRM  60
   61 RTSVNVVGDS FGAGIVYHLS KSELDTIDSQ HRMHEDIEMT KTQSVYDDTK NHRESNSNQC 120
  121 VYAAHNSVVI DECKSLHYVE YQSWV

Type	Start	End	Confidence
Non-Cytoplasmic	1	14	0.47
Transmembrane Helix	15	42	0.75
Cytoplasmic	43	145	0.56