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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|33414601
Protein type: Transmembrane
Type Confidence: 0.62
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRWIFCNIV LHILIYLAEF SHEQESYSSN EKIRKDYSDD NNYEPTPSYE KRKKEYGKDE  60
   61 SYIKNYRGNN FSYDLSKNSS IFLHMGNGSN SKTLKRCNKK KNIKTNFLRP IEEEKTVLNN 120
  121 YVYKGVNFLD TIKRNDSSYK FDVYKDTSFL KNREYKELIT MQYDYAYLEA TKEVLYLIPK 180
  181 DKDYHKFYKN KLEKILFNLK DSLKLLREGY IQSKLEMIRI HSDIDILNEF HQGNIINDNY 240
  241 FNNEIKKKKE DMEKYIREYN LYIYKYENQL KIEIQKLTNE VSINLNKSTC EKNCYYYILK 300
  301 LEKYKNIIKD KINKWKDLPE IYIDDKSFSY TFLKDVINNK IDIYKTISSF ISTQKQLYYL 360
  361 EYIYIMNKNT LNLLSYNIQK TDINSSSKYT YTKSHFLKDN HILLSKYYTA KFIDILNKTY 420
  421 YYNLYKNKIL LFNKYIIKLR NDLKEYAFKS IQFIQDKIKK HKDELSIENI LQEVNNIYIK 480
  481 YDTSINEISK YNNLIINTDL QIVQQKLLEI KQKKNDITHK VQLINHIYKN IHDEILNKKN 540
  541 NEITKIIINN IKDHKKDLQD LLLFIQQIKQ YNILTDHNIT QCNNYYKEII KMKEDINHIH 600
  601 IYIQPILNNL HTLKQVQNNK IKYEEHIKQI LQKIYDKKES LKKIILLKDE AQLDITLLDD 660
  661 LIQKQTQTQT QTQKQTLIQN NETIQLISGQ EDKHESNPFN HIQTYIQQKD TQNKNIQNLL 720
  721 KSLYNGNINT FIDTISKYIL KQKDIELTQH VYTDEKINDY LEEIKNEQNK IDKTIDDIKI 780
  781 QETLKQITHI VNNIKTIKKD LLKEFIQHLI KYMNERYQNM QQGYNNLTNY INQYEEENNN 840
  841 MKQYITTIRN IQKIYYDNIY AKEKEIRSGQ YYKDFITSRK NIYNIRENIS KNVDMIKNEE 900
  901 KKKIQNCVDK YNSIKQYVKM FKNGDTQDEN NNNNNDIYDK LIVPLDSIKQ NIDKYNTEHN 960
  961 FITFTNKINT HNKKNQEMME EFIYVYKRLK ILKILNISLK ACEKNNKSIN TLNDKTQELK1020
 1021 KIVTHEIDLL QKDILTSQIS NKNVLLLNDL LKEIEQYIID VHKLKKKSND LFTYYEQSKN1080
 1081 YFYFKNKKDN FDIQKTINKM NEWLAIKNYI NEINKNYQTL YEKKINVLLH NSKSYVQYFY1140
 1141 DHIINLILQK KNYLENTLKT KIQDNEHSLY ALQQNEEYQK VKNEKDQNEI KKIKQLIEKN1200
 1201 KNDILTYENN IEQIEQKNIE LKTNAQNKDD QIVNTLNEVK KKIIYTYEKV DNQISNVLKN1260
 1261 YEEGKVEYDK NVVQNVNDAD DTNDIDEIND IDEINDIDEI NDIDEINDID EIKDIDHIKH1320
 1321 FDDTKHFDDI YHADDTRDEY HIALSNYIKT ELRNINLQEI KNNIIKIFKE FESAHKEIKK1380
 1381 ESKQINKEFT KMDVVINQLR DIDRQMLDLY KELDEKYSEF NKTKIEEINN IRENINNVEI1440
 1441 WYEKNIIEYF LRHMNDQKDK AAKYMENIDT YKNNIEIISK QINPENYVET LNKSNMYSYV1500
 1501 EKANDLFYKQ INNIIINSNQ LKNEAFTIDE LQNIQKNRKN LLTKKQQIIQ YTNEIENIFN1560
 1561 EIKNINNILV LTNYKSILQD ISQNINHVSI YTEQLHNLYI KLEEEKEQMK TLYHKSNVLH1620
 1621 NQINFNEDAF INNLLINIEK IKNDITHIKE KTNIYMIDVN KSKNNAQLYF HNTLRGNEKI1680
 1681 EYLKNLKNST NQQITLQELK QVQENVEKVK DIYNQTIKYE EKIKKNYHII TDYENKINDI1740
 1741 LHNSFIKQIN MESSNNKKQT KQIIDIINDK TFEEHIKTSK TKINMLKEQS QMKHIDKTLL1800
 1801 NEQALKLFVD INSTNNNLDN MLSEINSIQN NIHTYIQEAN KSFDKFKIIC DQNVNDLLNK1860
 1861 LSLGDLNYMN HLKNLQNEIR NMNLEKNFML DKSKKIDEEE KKLDILKVNI SNINNSLDKL1920
 1921 KKYYEEALFQ KVKEKAENQK ENIEKIKQEI NTLSDVFKKP FFFIQLNTDS SQHEKDINNN1980
 1981 VETYKNNIDE IYNVFIQSYN LIQKYSSEIF SSTLNYIQTK EIKEKSIKEQ NQLNQNEKEA2040
 2041 FVLLKNIKIN ETIKLFKQIK NERQNDVHNI KEDYNLLQQY LNYMKNEMEQ LKKYKNDVHM2100
 2101 DKNYVENNNG EKEKLLKETI SSYYDKINNI NNKLYIYKNK EDTYFNNMIK VSEILNIIIK2160
 2161 KKQQNEQRIV INAEYDSSLI NKDEEIKKEI NNQIIELNKH NENISNIFKD IQNIKKQSQD2220
 2221 IITNMNDMHK STILLVDIIQ KKEEALNKQK NILRNIDNIL NKKENIIDKV IKCNCDDYKD2280
 2281 ILIQNETEYQ KLQNINHTYE EKKKSIDILK IKNIKQKNIQ EYKNKLEQMN TIINQSIEQH2340
 2341 VFINADILQN EKIKLEEIIK NLDILDEQIM TYHNSIDELY KLGIQCDNHL ITTISVVVNK2400
 2401 NTTKIMIHIK KQKEDIQKIN NYIQTNYNII NEEALQFHRL YGHNLISEDD KNNLVHIIKE2460
 2461 QKNIYTQKEI DISKIIKHVK KGLYSLNEHD MNHDTHMNII NEHINNNILQ PYTQLINMIK2520
 2521 DIDNVFIKIQ NNKFEQIQKY IEIIKSLEQL NKNINTDNLN KLKDTQNKLI NIETEMKHKQ2580
 2581 KQLINKMNDI EKDNITDQYM HDVQQNIFEP ITLKMNEYNT LLNDDHNNNI NNEHQFNHLN2640
 2641 SLHTKIFSHN YNKEQQQEYI TNIMQRIDVF INDLDTYQYE YYFYEWNQEY KQIDKNKINQ2700
 2701 HINNIKNNLI HVKKQFEHTL ENIKNNENIF DNIQLKKKDI DDIIININNT KETYLKELNK2760
 2761 KKMLQNKKKV DEKSEINNHH TLQHDNQNVE QKNKIKDHNL ITKPNNNSSE ESHQNEQMKE2820
 2821 QNKNILEKQT RNIKPHHVHN HNHNHNHNHN HNHNHNQNQK DSTKLQEQDI STHKLHNTIH2880
 2881 EQQSKDNHQG NREKKQKNGN HERMYFASGI VVSILFLSSL GFVINSKNNK QEYDKEQEKQ2940
 2941 QQNDFVCDNN KMDDKSTQKY GRNQEEVMEI SFDNDYI

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