YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33348836
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGYIVLCCL FVTAAAITHQ ELVGAEWSAF KALHGKDYAS DTEEYYRLKI YMENRLKIAR  60
   61 HNEKYAKSQV SYKLAMNEFG DLLHHEFVST RNGFKRNYRD SPREGSFFVE PEGFEDLQLP 120
  121 KTVDWRKKGA VTPVKNQGQC GSCWAFSTTG SLEGPHFRKT RKLVSLSEQN LVDCSRSFGN 180
  181 NGCEGGLMDN AFKYIKSNKG IDTEWSYPYN ATDGVCHFNR SDVGATDTGF VDIPEGDENK 240
  241 LKKAVAAVGP VSVAIDASHE SFQFYSEGVY DEPECSSEQL DHGVLVVGYG TKDGQDYWLV 300
  301 KNSWGTTWGD EGYIYMTRNK DNQCGIASSA SYPLV

Type	Start	End	Confidence
Signal Peptide	1	20	0.94
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	335	0.99