YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33348834
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRLSLLCAI VAVTVAANSH EILRTQWEAF KTTHKKSYES HMEELLRFKI FTENSLIIAK  60
   61 HNAKYAKGLV SYKLGMNQFG DLLAHEFAKI FNGYRGQRTS RGSTFMPPAN VNDSSLPSTV 120
  121 DWRKKGAVTP VKDQGQCGSC WAFSATGSLE GQHFLKDGEL VSLSEQNLVD CSQSFGNNGC 180
  181 EGGLMDNAFK YIKANDGIDA EESYPYEAMD DKCRFKKEDV GATDTGFVDI EGGSEDDLKK 240
  241 AVATVGPISV AIDAGHSSFQ LYSEGVYDEP ECSSEELDHG VLAVGYGVKD GKKYWLVKNS 300
  301 WGGSWGDNGY ILMSRDKNNQ CGIASAASYP LV

Type	Start	End	Confidence
Signal Peptide	1	19	0.95
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	332	0.99